Refinegems Docs Source Modules Examples Ipynb At Main Draeger Lab

Refinegems Examples Ipynb At Main Draeger Lab Refinegems Github Refinegems is a python package inteded to help with the curation of genome scale metabolic models (gems). refinegems docs source modules examples.ipynb at main · draeger lab refinegems. Refinegems is a python based toolbox for the curation and analysis of genome scale metabolic models (gems). this documentation provides information on how to install the toolbox, how to use it either via command line or code and provides different examples of use cases.

Refinegems Docs Source Modules Examples Ipynb At Main Draeger Lab Currently refinegems can be used for the investigation of a gem, it can complete the following tasks: the kegg database (note: this requires the gff file and the kegg identifier of your organism.) or the biocyc database (note: this requires that a database entry for your organism exists in biocyc.). If you used any functions from refinegems until now and want to use version 2.0.0 in the future, make sure to check your code after the version change. see examples to learn how to use refinegems. note that at this time most of the modules only make sense when you use the respective main functions:. Refinegems: a python package intended to help with the curation of genome scale metabolic models (gems). Patch 3 for read the docs by @gwennygit in github draeger lab refinegems pull 140 updated conf.py for docs by @gwennygit in github draeger lab refinegems pull 141.

Specsim Docs Nb Simulationexamples Ipynb At Main Desihub Specsim Github Refinegems: a python package intended to help with the curation of genome scale metabolic models (gems). Patch 3 for read the docs by @gwennygit in github draeger lab refinegems pull 140 updated conf.py for docs by @gwennygit in github draeger lab refinegems pull 141. The refinegems command line tool provides limited access to some of the basic functionalities concering the media database, including downloading a config file and retrieving a list of all available media:. It is entirely possible to import a module (for example called *my module.py*) containing a function or variable called `x` and also to have something called `x` in your main program. Built with sphinx using a theme provided by read the docs. Refinegems refinegems is a python package intended to help with the curation of genome scale metabolic models (gems). the documentation can be found here.

Summit Docs Source Tutorials Intro Ipynb At Main Sustainable The refinegems command line tool provides limited access to some of the basic functionalities concering the media database, including downloading a config file and retrieving a list of all available media:. It is entirely possible to import a module (for example called *my module.py*) containing a function or variable called `x` and also to have something called `x` in your main program. Built with sphinx using a theme provided by read the docs. Refinegems refinegems is a python package intended to help with the curation of genome scale metabolic models (gems). the documentation can be found here.

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